SRC/zgedmdq.f90(3) Library Functions Manual SRC/zgedmdq.f90(3)

SRC/zgedmdq.f90


subroutine zgedmdq (jobs, jobz, jobr, jobq, jobt, jobf, whtsvd, m, n, f, ldf, x, ldx, y, ldy, nrnk, tol, k, eigs, z, ldz, res, b, ldb, v, ldv, s, lds, zwork, lzwork, work, lwork, iwork, liwork, info)
ZGEDMDQ computes the Dynamic Mode Decomposition (DMD) for a pair of data snapshot matrices.

ZGEDMDQ computes the Dynamic Mode Decomposition (DMD) for a pair of data snapshot matrices.

Purpose:

    ZGEDMDQ computes the Dynamic Mode Decomposition (DMD) for
    a pair of data snapshot matrices, using a QR factorization
    based compression of the data. For the input matrices
    X and Y such that Y = A*X with an unaccessible matrix
    A, ZGEDMDQ computes a certain number of Ritz pairs of A using
    the standard Rayleigh-Ritz extraction from a subspace of
    range(X) that is determined using the leading left singular 
    vectors of X. Optionally, ZGEDMDQ returns the residuals 
    of the computed Ritz pairs, the information needed for
    a refinement of the Ritz vectors, or the eigenvectors of
    the Exact DMD.
    For further details see the references listed
    below. For more details of the implementation see [3].      

References:

    [1] P. Schmid: Dynamic mode decomposition of numerical
        and experimental data,
        Journal of Fluid Mechanics 656, 5-28, 2010.
    [2] Z. Drmac, I. Mezic, R. Mohr: Data driven modal
        decompositions: analysis and enhancements,
        SIAM J. on Sci. Comp. 40 (4), A2253-A2285, 2018.
    [3] Z. Drmac: A LAPACK implementation of the Dynamic
        Mode Decomposition I. Technical report. AIMDyn Inc.
        and LAPACK Working Note 298.      
    [4] J. Tu, C. W. Rowley, D. M. Luchtenburg, S. L. 
        Brunton, N. Kutz: On Dynamic Mode Decomposition:
        Theory and Applications, Journal of Computational
        Dynamics 1(2), 391 -421, 2014.

Developed and supported by:

    Developed and coded by Zlatko Drmac, Faculty of Science,
    University of Zagreb;  drmac@math.hr
    In cooperation with
    AIMdyn Inc., Santa Barbara, CA.
    and supported by
    - DARPA SBIR project 'Koopman Operator-Based Forecasting
    for Nonstationary Processes from Near-Term, Limited
    Observational Data' Contract No: W31P4Q-21-C-0007
    - DARPA PAI project 'Physics-Informed Machine Learning
    Methodologies' Contract No: HR0011-18-9-0033
    - DARPA MoDyL project 'A Data-Driven, Operator-Theoretic
    Framework for Space-Time Analysis of Process Dynamics'
    Contract No: HR0011-16-C-0116
    Any opinions, findings and conclusions or recommendations 
    expressed in this material are those of the author and 
    do not necessarily reflect the views of the DARPA SBIR 
    Program Office.      

Developed and supported by:

    Distribution Statement A: 
    Approved for Public Release, Distribution Unlimited.
    Cleared by DARPA on September 29, 2022

Parameters

JOBS
    JOBS (input) CHARACTER*1
    Determines whether the initial data snapshots are scaled
    by a diagonal matrix. The data snapshots are the columns
    of F. The leading N-1 columns of F are denoted X and the
    trailing N-1 columns are denoted Y. 
    'S' :: The data snapshots matrices X and Y are multiplied
           with a diagonal matrix D so that X*D has unit
           nonzero columns (in the Euclidean 2-norm)
    'C' :: The snapshots are scaled as with the 'S' option.
           If it is found that an i-th column of X is zero
           vector and the corresponding i-th column of Y is
           non-zero, then the i-th column of Y is set to
           zero and a warning flag is raised.
    'Y' :: The data snapshots matrices X and Y are multiplied
           by a diagonal matrix D so that Y*D has unit
           nonzero columns (in the Euclidean 2-norm)    
    'N' :: No data scaling.   

JOBZ

    JOBZ (input) CHARACTER*1
    Determines whether the eigenvectors (Koopman modes) will
    be computed.
    'V' :: The eigenvectors (Koopman modes) will be computed
           and returned in the matrix Z.
           See the description of Z.
    'F' :: The eigenvectors (Koopman modes) will be returned
           in factored form as the product Z*V, where Z
           is orthonormal and V contains the eigenvectors
           of the corresponding Rayleigh quotient.
           See the descriptions of F, V, Z.
    'Q' :: The eigenvectors (Koopman modes) will be returned
           in factored form as the product Q*Z, where Z
           contains the eigenvectors of the compression of the
           underlying discretized operator onto the span of
           the data snapshots. See the descriptions of F, V, Z.
           Q is from the initial QR factorization.  
    'N' :: The eigenvectors are not computed.  

JOBR

    JOBR (input) CHARACTER*1 
    Determines whether to compute the residuals.
    'R' :: The residuals for the computed eigenpairs will
           be computed and stored in the array RES.
           See the description of RES.
           For this option to be legal, JOBZ must be 'V'.
    'N' :: The residuals are not computed.

JOBQ

    JOBQ (input) CHARACTER*1 
    Specifies whether to explicitly compute and return the
    unitary matrix from the QR factorization.
    'Q' :: The matrix Q of the QR factorization of the data
           snapshot matrix is computed and stored in the
           array F. See the description of F.       
    'N' :: The matrix Q is not explicitly computed.

JOBT

    JOBT (input) CHARACTER*1 
    Specifies whether to return the upper triangular factor
    from the QR factorization.
    'R' :: The matrix R of the QR factorization of the data 
           snapshot matrix F is returned in the array Y.
           See the description of Y and Further details.       
    'N' :: The matrix R is not returned. 

JOBF

    JOBF (input) CHARACTER*1
    Specifies whether to store information needed for post-
    processing (e.g. computing refined Ritz vectors)
    'R' :: The matrix needed for the refinement of the Ritz
           vectors is computed and stored in the array B.
           See the description of B.
    'E' :: The unscaled eigenvectors of the Exact DMD are 
           computed and returned in the array B. See the
           description of B.
    'N' :: No eigenvector refinement data is computed.   
    To be useful on exit, this option needs JOBQ='Q'.    

WHTSVD WHTSVD (input) INTEGER, WHSTVD in { 1, 2, 3, 4 } Allows for a selection of the SVD algorithm from the LAPACK library. 1 :: ZGESVD (the QR SVD algorithm) 2 :: ZGESDD (the Divide and Conquer algorithm; if enough workspace available, this is the fastest option) 3 :: ZGESVDQ (the preconditioned QR SVD ; this and 4 are the most accurate options) 4 :: ZGEJSV (the preconditioned Jacobi SVD; this and 3 are the most accurate options) For the four methods above, a significant difference in the accuracy of small singular values is possible if the snapshots vary in norm so that X is severely ill-conditioned. If small (smaller than EPS*||X||) singular values are of interest and JOBS=='N', then the options (3, 4) give the most accurate results, where the option 4 is slightly better and with stronger theoretical background. If JOBS=='S', i.e. the columns of X will be normalized, then all methods give nearly equally accurate results.
M

    M (input) INTEGER, M >= 0 
    The state space dimension (the number of rows of F).

N

    N (input) INTEGER, 0 <= N <= M
    The number of data snapshots from a single trajectory,
    taken at equidistant discrete times. This is the 
    number of columns of F.

F

    F (input/output) COMPLEX(KIND=WP) M-by-N array
    > On entry,
    the columns of F are the sequence of data snapshots 
    from a single trajectory, taken at equidistant discrete
    times. It is assumed that the column norms of F are 
    in the range of the normalized floating point numbers. 
    < On exit,
    If JOBQ == 'Q', the array F contains the orthogonal 
    matrix/factor of the QR factorization of the initial 
    data snapshots matrix F. See the description of JOBQ. 
    If JOBQ == 'N', the entries in F strictly below the main
    diagonal contain, column-wise, the information on the 
    Householder vectors, as returned by ZGEQRF. The 
    remaining information to restore the orthogonal matrix
    of the initial QR factorization is stored in ZWORK(1:MIN(M,N)). 
    See the description of ZWORK.

LDF

    LDF (input) INTEGER, LDF >= M 
    The leading dimension of the array F.

X

    X (workspace/output) COMPLEX(KIND=WP) MIN(M,N)-by-(N-1) array
    X is used as workspace to hold representations of the
    leading N-1 snapshots in the orthonormal basis computed
    in the QR factorization of F.
    On exit, the leading K columns of X contain the leading
    K left singular vectors of the above described content
    of X. To lift them to the space of the left singular
    vectors U(:,1:K) of the input data, pre-multiply with the 
    Q factor from the initial QR factorization. 
    See the descriptions of F, K, V  and Z.

LDX

    LDX (input) INTEGER, LDX >= N  
    The leading dimension of the array X. 

Y

    Y (workspace/output) COMPLEX(KIND=WP) MIN(M,N)-by-(N) array
    Y is used as workspace to hold representations of the
    trailing N-1 snapshots in the orthonormal basis computed
    in the QR factorization of F.
    On exit, 
    If JOBT == 'R', Y contains the MIN(M,N)-by-N upper
    triangular factor from the QR factorization of the data
    snapshot matrix F.

LDY

    LDY (input) INTEGER , LDY >= N
    The leading dimension of the array Y.   

NRNK

    NRNK (input) INTEGER
    Determines the mode how to compute the numerical rank,
    i.e. how to truncate small singular values of the input
    matrix X. On input, if
    NRNK = -1 :: i-th singular value sigma(i) is truncated
                 if sigma(i) <= TOL*sigma(1)
                 This option is recommended.  
    NRNK = -2 :: i-th singular value sigma(i) is truncated
                 if sigma(i) <= TOL*sigma(i-1)
                 This option is included for R&D purposes.
                 It requires highly accurate SVD, which
                 may not be feasible.      
    The numerical rank can be enforced by using positive 
    value of NRNK as follows: 
    0 < NRNK <= N-1 :: at most NRNK largest singular values
    will be used. If the number of the computed nonzero
    singular values is less than NRNK, then only those
    nonzero values will be used and the actually used
    dimension is less than NRNK. The actual number of
    the nonzero singular values is returned in the variable
    K. See the description of K.

TOL

    TOL (input) REAL(KIND=WP), 0 <= TOL < 1
    The tolerance for truncating small singular values.
    See the description of NRNK.  

K

    K (output) INTEGER,  0 <= K <= N 
    The dimension of the SVD/POD basis for the leading N-1
    data snapshots (columns of F) and the number of the 
    computed Ritz pairs. The value of K is determined
    according to the rule set by the parameters NRNK and 
    TOL. See the descriptions of NRNK and TOL. 

EIGS

    EIGS (output) COMPLEX(KIND=WP) (N-1)-by-1 array
    The leading K (K<=N-1) entries of EIGS contain
    the computed eigenvalues (Ritz values).
    See the descriptions of K, and Z.

Z

    Z (workspace/output) COMPLEX(KIND=WP)  M-by-(N-1) array
    If JOBZ =='V' then Z contains the Ritz vectors. Z(:,i)
    is an eigenvector of the i-th Ritz value; ||Z(:,i)||_2=1.
    If JOBZ == 'F', then the Z(:,i)'s are given implicitly as
    Z*V, where Z contains orthonormal matrix (the product of
    Q from the initial QR factorization and the SVD/POD_basis
    returned by ZGEDMD in X) and the second factor (the 
    eigenvectors of the Rayleigh quotient) is in the array V, 
    as returned by ZGEDMD. That is,  X(:,1:K)*V(:,i)
    is an eigenvector corresponding to EIGS(i). The columns 
    of V(1:K,1:K) are the computed eigenvectors of the 
    K-by-K Rayleigh quotient.  
    See the descriptions of EIGS, X and V.      

LDZ

    LDZ (input) INTEGER , LDZ >= M
    The leading dimension of the array Z.

RES

    RES (output) REAL(KIND=WP) (N-1)-by-1 array
    RES(1:K) contains the residuals for the K computed 
    Ritz pairs, 
    RES(i) = || A * Z(:,i) - EIGS(i)*Z(:,i))||_2.
    See the description of EIGS and Z.      

B

    B (output) COMPLEX(KIND=WP)  MIN(M,N)-by-(N-1) array.
    IF JOBF =='R', B(1:N,1:K) contains A*U(:,1:K), and can
    be used for computing the refined vectors; see further 
    details in the provided references. 
    If JOBF == 'E', B(1:N,1;K) contains 
    A*U(:,1:K)*W(1:K,1:K), which are the vectors from the
    Exact DMD, up to scaling by the inverse eigenvalues.   
    In both cases, the content of B can be lifted to the 
    original dimension of the input data by pre-multiplying
    with the Q factor from the initial QR factorization.   
    Here A denotes a compression of the underlying operator.      
    See the descriptions of F and X.
    If JOBF =='N', then B is not referenced.

LDB

    LDB (input) INTEGER, LDB >= MIN(M,N)
    The leading dimension of the array B.

V

    V (workspace/output) COMPLEX(KIND=WP) (N-1)-by-(N-1) array
    On exit, V(1:K,1:K) V contains the K eigenvectors of
    the Rayleigh quotient. The Ritz vectors
    (returned in Z) are the product of Q from the initial QR
    factorization (see the description of F) X (see the 
    description of X) and V.

LDV

    LDV (input) INTEGER, LDV >= N-1
    The leading dimension of the array V.

S

    S (output) COMPLEX(KIND=WP) (N-1)-by-(N-1) array
    The array S(1:K,1:K) is used for the matrix Rayleigh
    quotient. This content is overwritten during
    the eigenvalue decomposition by ZGEEV.
    See the description of K.

LDS

    LDS (input) INTEGER, LDS >= N-1        
    The leading dimension of the array S.

LZWORK

    ZWORK (workspace/output) COMPLEX(KIND=WP) LWORK-by-1 array
    On exit, 
    ZWORK(1:MIN(M,N)) contains the scalar factors of the 
    elementary reflectors as returned by ZGEQRF of the 
    M-by-N input matrix F.   
    If the call to ZGEDMDQ is only workspace query, then
    ZWORK(1) contains the minimal complex workspace length and
    ZWORK(2) is the optimal complex workspace length. 
    Hence, the length of work is at least 2.
    See the description of LZWORK.      

LZWORK

    LZWORK (input) INTEGER
    The minimal length of the  workspace vector ZWORK.
    LZWORK is calculated as follows:
    Let MLWQR  = N (minimal workspace for ZGEQRF[M,N])
        MLWDMD = minimal workspace for ZGEDMD (see the
                 description of LWORK in ZGEDMD)
        MLWMQR = N (minimal workspace for 
                   ZUNMQR['L','N',M,N,N])
        MLWGQR = N (minimal workspace for ZUNGQR[M,N,N])
        MINMN  = MIN(M,N)      
    Then
    LZWORK = MAX(2, MIN(M,N)+MLWQR, MINMN+MLWDMD)
    is further updated as follows:
       if   JOBZ == 'V' or JOBZ == 'F' THEN 
            LZWORK = MAX(LZWORK, MINMN+MLWMQR)
       if   JOBQ == 'Q' THEN
            LZWORK = MAX(ZLWORK, MINMN+MLWGQR)      

WORK

    WORK (workspace/output) REAL(KIND=WP) LWORK-by-1 array
    On exit,
    WORK(1:N-1) contains the singular values of 
    the input submatrix F(1:M,1:N-1).
    If the call to ZGEDMDQ is only workspace query, then
    WORK(1) contains the minimal workspace length and
    WORK(2) is the optimal workspace length. hence, the
    length of work is at least 2.
    See the description of LWORK.

LWORK

    LWORK (input) INTEGER
    The minimal length of the  workspace vector WORK.
    LWORK is the same as in ZGEDMD, because in ZGEDMDQ
    only ZGEDMD requires real workspace for snapshots
    of dimensions MIN(M,N)-by-(N-1). 
    If on entry LWORK = -1, then a workspace query is
    assumed and the procedure only computes the minimal
    and the optimal workspace length for WORK.          

IWORK

    IWORK (workspace/output) INTEGER LIWORK-by-1 array
    Workspace that is required only if WHTSVD equals
    2 , 3 or 4. (See the description of WHTSVD).
    If on entry LWORK =-1 or LIWORK=-1, then the
    minimal length of IWORK is computed and returned in
    IWORK(1). See the description of LIWORK.

LIWORK

    LIWORK (input) INTEGER
    The minimal length of the workspace vector IWORK.
    If WHTSVD == 1, then only IWORK(1) is used; LIWORK >=1
    Let M1=MIN(M,N), N1=N-1. Then
    If WHTSVD == 2, then LIWORK >= MAX(1,8*MIN(M1,N1))
    If WHTSVD == 3, then LIWORK >= MAX(1,M1+N1-1)
    If WHTSVD == 4, then LIWORK >= MAX(3,M1+3*N1)
    If on entry LIWORK = -1, then a workspace query is
    assumed and the procedure only computes the minimal
    and the optimal workspace lengths for both WORK and
    IWORK. See the descriptions of WORK and IWORK.

INFO

    INFO (output) INTEGER
    -i < 0 :: On entry, the i-th argument had an
              illegal value
       = 0 :: Successful return.
       = 1 :: Void input. Quick exit (M=0 or N=0).
       = 2 :: The SVD computation of X did not converge.
              Suggestion: Check the input data and/or
              repeat with different WHTSVD.
       = 3 :: The computation of the eigenvalues did not
              converge.
       = 4 :: If data scaling was requested on input and
              the procedure found inconsistency in the data
              such that for some column index i,
              X(:,i) = 0 but Y(:,i) /= 0, then Y(:,i) is set
              to zero if JOBS=='C'. The computation proceeds
              with original or modified data and warning
              flag is set with INFO=4.  

Author

Zlatko Drmac

Definition at line 550 of file zgedmdq.f90.

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