NAME

gv_R - graph manipulation in R

SYNOPSIS

System.loadLibrary("gv");

USAGE

INTRODUCTION

gv_R is a dynamically loaded extension for R that provides access to the graph facilities of graphviz.

COMMANDS

New graphs
New empty graph: SWIGTYPE_p_Agraph_t gv.graph (string name);
SWIGTYPE_p_Agraph_t gv.digraph (string name);
SWIGTYPE_p_Agraph_t gv.strictgraph (string name);
SWIGTYPE_p_Agraph_t gv.strictdigraph (string name);
New graph from a dot-syntax string or file: SWIGTYPE_p_Agraph_t gv.readstring (string string);
SWIGTYPE_p_Agraph_t gv.read (string filename);
SWIGTYPE_p_Agraph_t gv.read (SWIGTYPE_p_FILE f);
Add new subgraph to existing graph: SWIGTYPE_p_Agraph_t gv.graph (SWIGTYPE_p_Agraph_t g, string name);
New nodes
Add new node to existing graph: SWIGTYPE_p_Agnode_t gv.node (SWIGTYPE_p_Agraph_t g, string name);
New edges
Add new edge between existing nodes: SWIGTYPE_p_Agedge_t gv.edge (SWIGTYPE_p_Agnode_t t, SWIGTYPE_p_Agnode_t h);
Add a new edge between an existing tail node, and a named head node which will be induced in the graph if it doesn't already exist: SWIGTYPE_p_Agedge_t gv.edge (SWIGTYPE_p_Agnode_t t, string hname);
Add a new edge between an existing head node, and a named tail node which will be induced in the graph if it doesn't already exist: SWIGTYPE_p_Agedge_t gv.edge (string tname, SWIGTYPE_p_Agnode_t h);
Add a new edge between named tail and head nodes which will be induced in the graph if they don't already exist: SWIGTYPE_p_Agedge_t gv.edge (SWIGTYPE_p_Agraph_t g, string tname, string hname);
Setting attribute values
Set value of named attribute of graph/node/edge - creating attribute if necessary: string gv.setv (SWIGTYPE_p_Agraph_t g, string attr, string val);
string gv.setv (SWIGTYPE_p_Agnode_t n, string attr, string val);
string gv.setv (SWIGTYPE_p_Agedge_t e, string attr, string val);
Set value of existing attribute of graph/node/edge (using attribute handle): string gv.setv (SWIGTYPE_p_Agraph_t g, SWIGTYPE_p_Agsym_t a, string val);
string gv.setv (SWIGTYPE_p_Agnode_t n, SWIGTYPE_p_Agsym_t a, string val);
string gv.setv (SWIGTYPE_p_Agedge_t e, SWIGTYPE_p_Agsym_t a, string val);
Getting attribute values
Get value of named attribute of graph/node/edge: string gv.getv (SWIGTYPE_p_Agraph_t g, string attr);
string gv.getv (SWIGTYPE_p_Agnode_t n, string attr);
string gv.getv (SWIGTYPE_p_Agedge_t e, string attr);
Get value of attribute of graph/node/edge (using attribute handle): string gv.getv (SWIGTYPE_p_Agraph_t g, SWIGTYPE_p_Agsym_t a);
string gv.getv (SWIGTYPE_p_Agnode_t n, SWIGTYPE_p_Agsym_t a);
string gv.getv (SWIGTYPE_p_Agedge_t e, SWIGTYPE_p_Agsym_t a);
Obtain names from handles: string gv.nameof (SWIGTYPE_p_Agraph_t g);
string gv.nameof (SWIGTYPE_p_Agnode_t n);
string gv.nameof (SWIGTYPE_p_Agsym_t a);
Find handles from names: SWIGTYPE_p_Agraph_t gv.findsubg (SWIGTYPE_p_Agraph_t g, string name);
SWIGTYPE_p_Agnode_t gv.findnode (SWIGTYPE_p_Agraph_t g, string name);
SWIGTYPE_p_Agedge_t gv.findedge (SWIGTYPE_p_Agnode_t t, SWIGTYPE_p_Agnode_t h);
SWIGTYPE_p_Agsym_t gv.findattr (SWIGTYPE_p_Agraph_t g, string name);
SWIGTYPE_p_Agsym_t gv.findattr (SWIGTYPE_p_Agnode_t n, string name);
SWIGTYPE_p_Agsym_t gv.findattr (SWIGTYPE_p_Agedge_t e, string name);
Misc graph navigators returning handles: SWIGTYPE_p_Agnode_t gv.headof (SWIGTYPE_p_Agedge_t e);
SWIGTYPE_p_Agnode_t gv.tailof (SWIGTYPE_p_Agedge_t e);
SWIGTYPE_p_Agraph_t gv.graphof (SWIGTYPE_p_Agraph_t g);
SWIGTYPE_p_Agraph_t gv.graphof (SWIGTYPE_p_Agedge_t e);
SWIGTYPE_p_Agraph_t gv.graphof (SWIGTYPE_p_Agnode_t n);
SWIGTYPE_p_Agraph_t gv.rootof (SWIGTYPE_p_Agraph_t g);
Obtain handles of proto node/edge for setting default attribute values: SWIGTYPE_p_Agnode_t gv.protonode (SWIGTYPE_p_Agraph_t g);
SWIGTYPE_p_Agedge_t gv.protoedge (SWIGTYPE_p_Agraph_t g);
Iterators
Iteration termination tests: bool gv.ok (SWIGTYPE_p_Agraph_t g);
bool gv.ok (SWIGTYPE_p_Agnode_t n);
bool gv.ok (SWIGTYPE_p_Agedge_t e);
bool gv.ok (SWIGTYPE_p_Agsym_t a);
Iterate over subgraphs of a graph: SWIGTYPE_p_Agraph_t gv.firstsubg (SWIGTYPE_p_Agraph_t g);
SWIGTYPE_p_Agraph_t gv.nextsubg (SWIGTYPE_p_Agraph_t g, SWIGTYPE_p_Agraph_t sg);
Iterate over supergraphs of a graph (obscure and rarely useful): SWIGTYPE_p_Agraph_t gv.firstsupg (SWIGTYPE_p_Agraph_t g);
SWIGTYPE_p_Agraph_t gv.nextsupg (SWIGTYPE_p_Agraph_t g, SWIGTYPE_p_Agraph_t sg);
Iterate over edges of a graph: SWIGTYPE_p_Agedge_t gv.firstedge (SWIGTYPE_p_Agraph_t g);
SWIGTYPE_p_Agedge_t gv.nextedge (SWIGTYPE_p_Agraph_t g, SWIGTYPE_p_Agedge_t e);
Iterate over outedges of a graph: SWIGTYPE_p_Agedge_t gv.firstout (SWIGTYPE_p_Agraph_t g);
SWIGTYPE_p_Agedge_t gv.nextout (SWIGTYPE_p_Agraph_t g, SWIGTYPE_p_Agedge_t e);
Iterate over edges of a node: SWIGTYPE_p_Agedge_t gv.firstedge (SWIGTYPE_p_Agnode_t n);
SWIGTYPE_p_Agedge_t gv.nextedge (SWIGTYPE_p_Agnode_t n, SWIGTYPE_p_Agedge_t e);
Iterate over out-edges of a node: SWIGTYPE_p_Agedge_t gv.firstout (SWIGTYPE_p_Agnode_t n);
SWIGTYPE_p_Agedge_t gv.nextout (SWIGTYPE_p_Agnode_t n, SWIGTYPE_p_Agedge_t e);
Iterate over head nodes reachable from out-edges of a node: SWIGTYPE_p_Agnode_t gv.firsthead (SWIGTYPE_p_Agnode_t n);
SWIGTYPE_p_Agnode_t gv.nexthead (SWIGTYPE_p_Agnode_t n, SWIGTYPE_p_Agnode_t h);
Iterate over in-edges of a graph: SWIGTYPE_p_Agedge_t gv.firstin (SWIGTYPE_p_Agraph_t g);
SWIGTYPE_p_Agedge_t gv.nextin (SWIGTYPE_p_Agnode_t n, SWIGTYPE_p_Agedge_t e);
Iterate over in-edges of a node: SWIGTYPE_p_Agedge_t gv.firstin (SWIGTYPE_p_Agnode_t n);
SWIGTYPE_p_Agedge_t gv.nextin (SWIGTYPE_p_Agraph_t g, SWIGTYPE_p_Agedge_t e);
Iterate over tail nodes reachable from in-edges of a node: SWIGTYPE_p_Agnode_t gv.firsttail (SWIGTYPE_p_Agnode_t n);
SWIGTYPE_p_Agnode_t gv.nexttail (SWIGTYPE_p_Agnode_t n, SWIGTYPE_p_Agnode_t t);
Iterate over nodes of a graph: SWIGTYPE_p_Agnode_t gv.firstnode (SWIGTYPE_p_Agraph_t g);
SWIGTYPE_p_Agnode_t gv.nextnode (SWIGTYPE_p_Agraph_t g, SWIGTYPE_p_Agnode_t n);
Iterate over nodes of an edge: SWIGTYPE_p_Agnode_t gv.firstnode (SWIGTYPE_p_Agedge_t e);
SWIGTYPE_p_Agnode_t gv.nextnode (SWIGTYPE_p_Agedge_t e, SWIGTYPE_p_Agnode_t n);
Iterate over attributes of a graph: SWIGTYPE_p_Agsym_t gv.firstattr (SWIGTYPE_p_Agraph_t g);
SWIGTYPE_p_Agsym_t gv.nextattr (SWIGTYPE_p_Agraph_t g, SWIGTYPE_p_Agsym_t a);
Iterate over attributes of an edge: SWIGTYPE_p_Agsym_t gv.firstattr (SWIGTYPE_p_Agedge_t e);
SWIGTYPE_p_Agsym_t gv.nextattr (SWIGTYPE_p_Agedge_t e, SWIGTYPE_p_Agsym_t a);
Iterate over attributes of a node: SWIGTYPE_p_Agsym_t gv.firstattr (SWIGTYPE_p_Agnode_t n);
SWIGTYPE_p_Agsym_t gv.nextattr (SWIGTYPE_p_Agnode_t n, SWIGTYPE_p_Agsym_t a);
Remove graph objects: bool gv.rm (SWIGTYPE_p_Agraph_t g);
bool gv.rm (SWIGTYPE_p_Agnode_t n);
bool gv.rm (SWIGTYPE_p_Agedge_t e);
Layout
Annotate a graph with layout attributes and values using a specific layout engine: bool gv.layout (SWIGTYPE_p_Agraph_t g, string engine);
Render
Render a layout into attributes of the graph: bool gv.render (SWIGTYPE_p_Agraph_t g);
Render a layout to stdout: bool gv.render (SWIGTYPE_p_Agraph_t g, string format);
Render to an open file: bool gv.render (SWIGTYPE_p_Agraph_t g, string format, SWIGTYPE_p_FILE fout);
Render a layout to an unopened file by name: bool gv.render (SWIGTYPE_p_Agraph_t g, string format, string filename);
Render to a string result: string gv.renderresult (SWIGTYPE_p_Agraph_t ing, string format);
gv.renderresult (SWIGTYPE_p_Agraph_t g, string format, string outdata);
Render to an open channel: bool gv.renderchannel (SWIGTYPE_p_Agraph_t g, string format, string channelname);
Render a layout to a malloc'ed string, to be free'd by the caller
(deprecated - too easy to leak memory)
(still needed for "eval [gv::renderdata $G tk]" ): string gv.renderdata (SWIGTYPE_p_Agraph_t g, string format);
Writing graph back to file: bool gv.write (SWIGTYPE_p_Agraph_t g, string filename);
bool gv.write (SWIGTYPE_p_Agraph_t g, SWIGTYPE_p_FILE f);
Graph transformation tools: bool gv.tred (SWIGTYPE_p_Agraph_t g);

KEYWORDS

graph, dot, neato, fdp, circo, twopi, R.